graphid.core package¶
Submodules¶
- graphid.core.__main__ module
- graphid.core._rhomb_dist module
- graphid.core.annot_inference module
_rectify_decision()
Consistency
Feedback
Feedback._check_edge()
Feedback.add_feedback_from()
Feedback.edge_decision()
Feedback.edge_decision_from()
Feedback.add_node_feedback()
Feedback.add_feedback()
Feedback._print_debug_ccs()
Feedback.feedback_keys
Feedback.feedback_data_keys
Feedback.apply_feedback_edges()
Feedback._rectify_feedback()
Feedback._rectify_feedback_item()
Feedback.all_feedback_items()
Feedback.all_feedback()
Feedback.clear_feedback()
Feedback.clear_edges()
Feedback.reset()
Feedback.reset_name_labels()
Feedback.clear_name_labels()
NameRelabel
MiscHelpers
AltConstructors
AnnotInference
- graphid.core.mixin_callbacks module
- graphid.core.mixin_dynamic module
DynamicUpdate
DynamicUpdate.ensure_edges_from()
DynamicUpdate._add_review_edges_from()
DynamicUpdate._add_review_edge()
DynamicUpdate._get_current_decision()
DynamicUpdate.on_between()
DynamicUpdate.on_within()
DynamicUpdate._update_neg_metagraph()
DynamicUpdate._positive_decision()
DynamicUpdate._negative_decision()
DynamicUpdate._uninferable_decision()
Recovery
NonDynamicUpdate
- graphid.core.mixin_helpers module
AttrAccess
AttrAccess.gen_node_attrs()
AttrAccess.gen_edge_attrs()
AttrAccess.gen_node_values()
AttrAccess.gen_edge_values()
AttrAccess.get_node_attrs()
AttrAccess.get_edge_attrs()
AttrAccess._get_edges_where()
AttrAccess.get_edges_where_eq()
AttrAccess.get_edges_where_ne()
AttrAccess.set_node_attrs()
AttrAccess.set_edge_attrs()
AttrAccess.get_edge_attr()
AttrAccess.set_edge_attr()
AttrAccess.get_annot_attrs()
AttrAccess.edges()
AttrAccess.has_edge()
AttrAccess.get_edge_data()
AttrAccess.get_nonvisual_edge_data()
AttrAccess.get_edge_dataframe()
AttrAccess.get_edge_df_text()
Convenience
Convenience.e_()
Convenience.pos_graph
Convenience.neg_graph
Convenience.incomp_graph
Convenience.unreviewed_graph
Convenience.unknown_graph
Convenience.print_graph_info()
Convenience.print_graph_connections()
Convenience.print_within_connection_info()
Convenience.pair_connection_info()
Convenience.node_tag_hist()
Convenience.edge_tag_hist()
Convenience.match_state_df()
DummyEdges
- graphid.core.mixin_invariants module
- graphid.core.mixin_loops module
- graphid.core.mixin_priority module
Priority
Priority.remaining_reviews()
Priority._pop()
Priority._push()
Priority._peek_many()
Priority._remove_edge_priority()
Priority._reinstate_edge_priority()
Priority._increase_priority()
Priority.remove_internal_priority()
Priority.reinstate_internal_priority()
Priority.prioritize()
Priority.push()
Priority.pop()
Priority.peek()
Priority.peek_many()
Priority.confidently_connected()
Priority.confidently_separated()
Priority.generate_reviews()
Priority._generate_reviews()
- graphid.core.mixin_redundancy module
_RedundancyComputers
_RedundancyComputers.is_pos_redundant()
_RedundancyComputers.is_neg_redundant()
_RedundancyComputers.find_neg_nids_to()
_RedundancyComputers.find_neg_nid_freq_to()
_RedundancyComputers.find_neg_redun_nids_to()
_RedundancyComputers.find_pos_redundant_pccs()
_RedundancyComputers.find_non_pos_redundant_pccs()
_RedundancyComputers.find_non_neg_redun_pccs()
_RedundancyComputers.find_pos_redun_nids()
_RedundancyComputers.find_neg_redun_nids()
_RedundancyAugmentation
Redundancy
- graphid.core.mixin_simulation module
- graphid.core.mixin_viz module
GraphVisualization
GraphVisualization._get_truth_colors()
GraphVisualization._error_color
GraphVisualization._get_cmap()
GraphVisualization.initialize_visual_node_attrs()
GraphVisualization.update_node_image_config()
GraphVisualization.update_node_image_attribute()
GraphVisualization.get_colored_edge_weights()
GraphVisualization.get_colored_weights()
GraphVisualization.visual_edge_attrs
GraphVisualization.visual_edge_attrs_appearance
GraphVisualization.visual_edge_attrs_space
GraphVisualization.visual_node_attrs
GraphVisualization.simplify_graph()
GraphVisualization.pin_node_layout()
GraphVisualization.update_visual_attrs()
GraphVisualization.show_graph()
GraphVisualization.show_edge()
GraphVisualization.debug_edge_repr()
GraphVisualization.repr_edge_data()
GraphVisualization.show_error_case()
GraphVisualization.show()
on_pick()
color_nodes()
nx_ensure_agraph_color()
- graphid.core.refresh module
- graphid.core.state module
_Common
_ConstHelper
EVIDENCE_DECISION
EVIDENCE_DECISION.UNREVIEWED
EVIDENCE_DECISION.NEGATIVE
EVIDENCE_DECISION.POSITIVE
EVIDENCE_DECISION.INCOMPARABLE
EVIDENCE_DECISION.UNKNOWN
EVIDENCE_DECISION.INT_TO_CODE
EVIDENCE_DECISION.INT_TO_NICE
EVIDENCE_DECISION.CODE_TO_NICE
EVIDENCE_DECISION.CODE_TO_INT
EVIDENCE_DECISION.NICE_TO_CODE
EVIDENCE_DECISION.NICE_TO_INT
EVIDENCE_DECISION.MATCH_CODE
EVIDENCE_DECISION.CODE
EVIDENCE_DECISION.NICE
META_DECISION
CONFIDENCE
QUAL
VIEW
VIEW.UNKNOWN
VIEW.R
VIEW.FR
VIEW.F
VIEW.FL
VIEW.L
VIEW.BL
VIEW.B
VIEW.BR
VIEW.U
VIEW.UF
VIEW.UB
VIEW.UL
VIEW.UR
VIEW.UFL
VIEW.UFR
VIEW.UBL
VIEW.UBR
VIEW.D
VIEW.DF
VIEW.DB
VIEW.DL
VIEW.DR
VIEW.DFL
VIEW.DFR
VIEW.DBL
VIEW.DBR
VIEW.INT_TO_CODE
VIEW.INT_TO_NICE
VIEW.CODE_TO_NICE
VIEW.CODE_TO_INT
VIEW.NICE_TO_CODE
VIEW.NICE_TO_INT
VIEW.DIST
VIEW.CODE
VIEW.CODE.B
VIEW.CODE.BL
VIEW.CODE.BR
VIEW.CODE.D
VIEW.CODE.DB
VIEW.CODE.DBL
VIEW.CODE.DBR
VIEW.CODE.DF
VIEW.CODE.DFL
VIEW.CODE.DFR
VIEW.CODE.DL
VIEW.CODE.DR
VIEW.CODE.F
VIEW.CODE.FL
VIEW.CODE.FR
VIEW.CODE.L
VIEW.CODE.R
VIEW.CODE.U
VIEW.CODE.UB
VIEW.CODE.UBL
VIEW.CODE.UBR
VIEW.CODE.UF
VIEW.CODE.UFL
VIEW.CODE.UFR
VIEW.CODE.UL
VIEW.CODE.UNKNOWN
VIEW.CODE.UR
VIEW.NICE
VIEW.NICE.B
VIEW.NICE.BL
VIEW.NICE.BR
VIEW.NICE.D
VIEW.NICE.DB
VIEW.NICE.DBL
VIEW.NICE.DBR
VIEW.NICE.DF
VIEW.NICE.DFL
VIEW.NICE.DFR
VIEW.NICE.DL
VIEW.NICE.DR
VIEW.NICE.F
VIEW.NICE.FL
VIEW.NICE.FR
VIEW.NICE.L
VIEW.NICE.R
VIEW.NICE.U
VIEW.NICE.UB
VIEW.NICE.UBL
VIEW.NICE.UBR
VIEW.NICE.UF
VIEW.NICE.UFL
VIEW.NICE.UFR
VIEW.NICE.UL
VIEW.NICE.UNKNOWN
VIEW.NICE.UR
VIEW.d
VIEW.f1
VIEW.f2
Module contents¶
Regenerate Input Command mkinit ~/code/graphid/graphid/core